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improved_manual
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@@ -1,28 +1,5 @@
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# midterm ml&dm1
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## not cool
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## real
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currently this shit is a blatant copy. changing soon.
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## how to
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load this thing on google colab dont run on device its so cooked
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how to git? do not `push --force`. prefer pull requests. its like github
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## roadmap
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we will plan to do this in multiple different ways using scikit-learn and pytorch. tensorflow is ancient.
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> [!NOTE]
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> ~phase out tensorflow. dont use it.~
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>
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> its 2 different platforms for 2 different types of people. use whatever ig
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maybe also fit more weather related stats? this dataset is taken from nasa so sources are there
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## collab
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seng tells me this project can be planned without code. basically someone find da waes and other people implements them
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thing is you click [here at scikit learn](https://scikit-learn.org/stable/supervised_learning.html) and tell me how many ways there are you can use to solve a problem. holy fucking shit. too many.
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not real
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@@ -0,0 +1,44 @@
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import pandas as pd
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import io
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from typing import Union
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def cut_headers(stream: Union[io.StringIO, io.FileIO, io.TextIOWrapper]):
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"""Remove custom header metadata from the CSV file."""
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headers = []
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exist_startheader = False
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while line := stream.readline():
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if "-BEGIN HEADER-" in line and not exist_startheader:
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exist_startheader = True
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headers.append(str(line.strip()))
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elif "-END HEADER-" in line and exist_startheader:
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headers.append(str(line.strip()))
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break
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elif exist_startheader:
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headers.append(str(line.strip()))
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elif not exist_startheader:
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continue
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if not exist_startheader:
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stream.seek(0)
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return "", stream
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return "\n".join(headers), stream
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def load_weather_data(file_path: str) -> pd.DataFrame:
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"""Load weather data and preprocess the datetime index."""
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with open(file_path, "r", encoding="utf-8") as file:
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_, csv_file = cut_headers(file)
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data = pd.read_csv(csv_file, na_values=-999)
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# Convert YEAR, MO, DY to datetime index
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if all(col in data.columns for col in ("YEAR", "MO", "DY")):
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dt_conv_table = {
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k: data[v] for v, k in zip(["YEAR", "MO", "DY"], ["year", "month", "day"])
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}
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data["date"] = pd.to_datetime(dt_conv_table)
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data.drop(columns=["YEAR", "MO", "DY"], inplace=True)
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data.set_index("date", inplace=True)
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data.dropna(inplace=True)
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data = data.asfreq("D") # Assumes regular daily data
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return data
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+15
-9
@@ -1,11 +1,12 @@
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import urllib.parse
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import urllib.request
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from datetime import datetime
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from global_config import DATA_FILE_NAME
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data_file = "hanoi_weather_data.csv"
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# Define parameters
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latitude, longitude = 21.04815477090267, 105.80123159165096 # lmao
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start_date = "1981-01-01"
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start_date = "1995-01-01"
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end_date = datetime.now().strftime("%Y-%m-%d") # Today's date
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# Define desired parameters
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@@ -17,8 +18,12 @@ end_date = datetime.now().strftime("%Y-%m-%d") # Today's date
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# WS10M MERRA-2 Wind Speed at 10 Meters (m/s)
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# WD10M MERRA-2 Wind Direction at 10 Meters (Degrees)
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# more at https://power.larc.nasa.gov/data-access-viewer/
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weather_params = ["QV2M"]
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weather_params = [
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"T2M",
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"QV2M",
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"RH2M",
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"PS",
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]
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params = {
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"parameters": ",".join(weather_params),
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@@ -39,14 +44,15 @@ base_url = "https://power.larc.nasa.gov/api/temporal/daily/point"
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url = f"{base_url}?{query_string}"
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# Make the API request using urllib
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try:
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if __name__ == "__main__":
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try:
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with urllib.request.urlopen(url) as response:
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if response.status == 200:
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csv_data = response.read().decode("utf-8")
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with open(DATA_FILE_NAME, "w", encoding="utf-8") as file:
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csv_data = response.read()
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with open(data_file, "wb") as file:
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file.write(csv_data)
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print("Data successfully downloaded and saved to 'hanoi_weather_data.csv'.")
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print(f"Data successfully downloaded and saved to {data_file}.")
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else:
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print(f"Failed to retrieve data: HTTP Status Code {response.status}")
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except urllib.error.URLError as e:
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except urllib.error.URLError as e:
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print(f"Failed to retrieve data: {e.reason}")
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@@ -1 +0,0 @@
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DATA_FILE_NAME = "hanoi_weather_data.csv"
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+11095
-16199
File diff suppressed because it is too large.
Load diff
@@ -1,93 +0,0 @@
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"extracting the load data step from the notebook"
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import io
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# from itertools import islice
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from typing import Union
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import pandas as pd
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from global_config import DATA_FILE_NAME
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def cut_headers(stream: Union[io.StringIO, io.FileIO, io.TextIOWrapper]):
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headers = []
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exist_startheader = False
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while line := stream.readline():
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if "-BEGIN HEADER-" in line and not exist_startheader:
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exist_startheader = True
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headers.append(str(line.strip()))
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elif "-END HEADER-" in line and exist_startheader:
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headers.append(str(line.strip()))
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break
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elif exist_startheader:
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# print(f"{line = }")
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headers.append(str(line.strip()))
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elif not exist_startheader:
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continue
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if not exist_startheader:
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# If no headers are found, reset the stream and return
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stream.seek(0)
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return "", stream
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return "\n".join(headers), stream
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# if __name__ == "__main__":
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# with open("hanoi_qv2m_latest.csv", "r", encoding="utf-8") as file:
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# header, file = cut_headers(file)
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# print("Extracted Header:")
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# print(header)
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# data = pd.read_csv(file)
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# print("\nFirst 5 Lines of Data:")
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# print(data.head())
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# print(data.isnull().sum())
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def load_data(
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weather_file_name, columns=["Year", "Month", "Day", "Humidity"].copy(), na=-999
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):
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with open(weather_file_name, "r", encoding="utf-8") as file:
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_header, file = cut_headers(file)
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data = pd.read_csv(file, na_values=na)
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# print(header)
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data.columns = columns
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return data
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def date_combine(data: pd.DataFrame):
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data["Date"] = pd.to_datetime(data[["Year", "Month", "Day"]])
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data = data.drop(columns=["Year", "Month", "Day"])
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data = data.set_index("Date")
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return data
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def validate_view(data: pd.DataFrame, verbose=False):
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if verbose:
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print(f"Shape with N/A values: {data.shape}")
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isn = data.isnull().sum().iloc[0]
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print(f"Count of N/A values: {isn}")
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data = data.dropna() # Drop the rows with missing values
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if verbose:
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isn = data.isnull().sum().iloc[0]
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print(f"Count after drop: {isn}")
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print(data.describe())
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return data
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def load_this_data(filename=DATA_FILE_NAME, verbose=False, *a):
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d = load_data(filename, *a)
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# if verbose:
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# print(d.columns)
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d = date_combine(d)
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# if verbose:
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# print(d.columns)
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d = validate_view(d, verbose)
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if verbose:
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print(d.head())
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# print(d.columns)
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return d
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if __name__ == "__main__":
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load_this_data(verbose=True)
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-2100
File diff suppressed because it is too large.
Load diff
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# import pandas as pd
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import os
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from matplotlib import pyplot as plt
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import numpy as np
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from sklearn.model_selection import train_test_split # type: ignore[import]
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from data_loader import load_weather_data
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from model_train import (
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cosine_lr_schedule,
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# cyclical_lr_schedule,
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evaluate_model,
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# exponential_decay_schedule,
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# linear_decay_schedule,
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# polynomial_decay_schedule,
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predict_linear_regression,
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run_autoregressive_prediction,
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# step_decay_schedule,
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train_linear_regression_gd,
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warmup_schedule,
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)
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from preprocessing import (
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add_rolling_features,
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create_sequences,
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inverse_scale,
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scale_data,
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)
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from visualize import (
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# inspect_residuals,
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plot_error_hist, # plot_loss_curve,
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plot_feature_importance,
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# plot_interactive_time_series,
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plot_loss_curve_with_annotations,
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plot_original_vs_scaled,
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plot_predictions,
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plot_residual_scatter,
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plot_residuals,
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plot_scatter,
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plot_time_series,
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plot_value_distribution,
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visualize_sequence_window,
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)
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plt.ioff()
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data_file = "hanoi_weather_data.csv"
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model_file = "theta.npy"
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# Step 1: Load data
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data = load_weather_data(data_file)
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# Add rolling features
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data = add_rolling_features(data, window=5)
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plot_value_distribution(data)
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plot_time_series(data, feature_names=["QV2M"], title="QV2M Time Series")
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# plot_interactive_time_series(data, feature_names=["QV2M"])
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# Step 2: Preprocess (scale and sequence)
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scaled_data, scaler = scale_data(data)
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plot_original_vs_scaled(data, scaled_data)
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seq_length = 50
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X, y = create_sequences(scaled_data, seq_length)
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# Flatten X to 2D (n_samples, seq_length * n_features)
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X = X.reshape(X.shape[0], -1)
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if y.ndim == 1:
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y = y.reshape(-1, 1) # Single target case
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visualize_sequence_window(data["QV2M"], seq_length=10, start_idx=1000)
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# Step 3: Train/test split
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test_size = 0.2
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date_index = data.index[seq_length:]
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X_train, X_test, y_train, y_test = train_test_split(
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X, y, test_size=test_size, shuffle=False
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)
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date_train, date_test = train_test_split(date_index, test_size=test_size, shuffle=False)
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# this is the lr schedulers
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cos_lr = lambda epoch: cosine_lr_schedule(
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epoch, max_lr=0.005, min_lr=0.0001, total_epochs=500
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)
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# step_lr = lambda epoch: step_decay_schedule(
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# epoch, initial_lr=0.01, drop=0.5, epochs_drop=100
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# )
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# expo_lr = lambda epoch: exponential_decay_schedule(
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# epoch, initial_lr=0.01, decay_rate=0.96, decay_steps=100
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# )
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# linear_lr = lambda epoch: linear_decay_schedule(
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# epoch, initial_lr=0.01, min_lr=0.001, total_epochs=1000
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# )
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# cycle_lr = lambda epoch: cyclical_lr_schedule(
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# epoch, base_lr=0.001, max_lr=0.01, step_size=200
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# )
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# poly_lr = lambda epoch: polynomial_decay_schedule(
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# epoch, initial_lr=0.005, min_lr=0.0001, total_epochs=1000, power=2
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# )
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# warmup_lr = lambda epoch: warmup_schedule(
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# epoch, warmup_epochs=10, initial_lr=0.001, max_lr=0.01
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# )
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# Combined learning rate schedule: Warmup + Cosine Annealing
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combined_lr = lambda epoch: (
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warmup_schedule(epoch, warmup_epochs=10, initial_lr=0.0001, max_lr=0.005)
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if epoch < 10
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else cosine_lr_schedule(epoch - 10, max_lr=0.005, min_lr=0.0001, total_epochs=990)
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)
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losses = None
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trained = None
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if os.path.isfile(model_file):
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if True or input("found model, train anyway? ").strip().lower() in "y":
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print("found model but training")
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trained = False
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else:
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print("found model")
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trained = True
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else:
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print("model not found, training")
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# Step 4: Train model with gradient descent
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if not trained:
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X_train, X_val, y_train, y_val = train_test_split(
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X_train, y_train, test_size=0.2, shuffle=False
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)
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theta, losses, val_losses = train_linear_regression_gd(
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X_train,
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y_train,
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lr_schedule=combined_lr, # Use the combined learning rate schedule
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n_epochs=1000,
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batch_size=64,
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patience=300,
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l2_reg=0.001, # Adjusted regularization strength
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val_data=(X_val, y_val), # Pass validation data
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)
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# Save model
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np.save(model_file, theta)
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else:
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# Load model
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theta = np.load(model_file)
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predictions = predict_linear_regression(X_test, theta)
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# Step 5: Evaluate
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mse, r2, mae = evaluate_model(y_test, predictions)
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print(f"MSE: {mse:.4f}, R2: {r2:.4f}, MAE: {mae:.4f}")
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# Step 6: Rescale predictions
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y_test_rescaled = inverse_scale(y_test, scaler, y_test.shape[1])
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predictions_rescaled = inverse_scale(predictions, scaler, y_test.shape[1])
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# Define feature names
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feature_names = data.columns.tolist()
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# Step 7: Visualize
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residuals = y_test - predictions
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errors = abs(residuals)
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plot_predictions(
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date_test,
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y_test_rescaled,
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predictions_rescaled,
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feature_names=feature_names,
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title="Actual vs Predicted",
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)
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plot_residuals(date_test.to_numpy(), residuals, feature_names=feature_names)
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plot_error_hist(errors, feature_names=feature_names)
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plot_scatter(y_test.reshape(-1, 1), predictions.reshape(-1, 1))
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plot_residual_scatter(y_test, predictions)
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# == inspect_residuals(predictions, residuals)
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if losses:
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plot_loss_curve_with_annotations(losses)
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if val_losses:
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plot_loss_curve_with_annotations(val_losses)
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feature_names = [f"{col}_t-{i}" for col in data.columns for i in range(seq_length)]
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plot_feature_importance(theta, feature_names=feature_names)
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# Step 8: Autoregressive Prediction
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autoregressive_predictions = run_autoregressive_prediction(
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theta, X_test, y_test, scaler, date_test, data.shape[1]
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)
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plt.ion()
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+350
@@ -0,0 +1,350 @@
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# from itertools import islice
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import time
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import numpy as np
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from matplotlib import pyplot as plt
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from sklearn.metrics import ( # type: ignore[import]
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mean_absolute_error,
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mean_squared_error,
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r2_score,
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)
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from preprocessing import inverse_scale
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def train_linear_regression_gd(
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X_train,
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y_train,
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lr_schedule=lambda _e: 0.01,
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n_epochs=1000,
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batch_size=32,
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patience=20,
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l2_reg=0.0,
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l1_reg=0.0,
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val_data=None, # Add validation data
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):
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# Ensure X_train is 2D
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assert X_train.ndim == 2, "X_train must be 2D (n_samples, seq_length * n_features)."
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# Ensure y_train is 2D
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if y_train.ndim == 1:
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y_train = y_train.reshape(-1, 1) # Handle single target case
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m, n = X_train.shape
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n_targets = y_train.shape[1] # Number of target variables
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# Add bias term
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X_b = np.hstack([np.ones((m, 1)), X_train]) # Add bias term
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# Initialize theta with small random values
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theta = np.random.randn(n + 1, n_targets) * 0.01
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losses = []
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val_losses = [] # Track validation losses
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best_loss = float("inf")
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patience_counter = 0
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X_val, y_val = val_data if val_data else (None, None)
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if X_val is not None:
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X_val_b = np.hstack(
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[np.ones((X_val.shape[0], 1)), X_val]
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) # Add bias term to validation data
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for epoch in range(n_epochs):
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start_time = time.time() # Start timing the epoch
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||||
# Shuffle the data at the start of each epoch
|
||||
indices = np.random.permutation(m)
|
||||
X_b_shuffled = X_b[indices]
|
||||
y_shuffled = y_train[indices]
|
||||
|
||||
epoch_loss = 0.0
|
||||
gradient_norm = 0.0
|
||||
|
||||
for i in range(0, m, batch_size):
|
||||
X_batch = X_b_shuffled[i : i + batch_size]
|
||||
y_batch = y_shuffled[i : i + batch_size]
|
||||
|
||||
lr = lr_schedule(epoch)
|
||||
predictions = X_batch @ theta # Shape: (batch_size, n_targets)
|
||||
errors = predictions - y_batch # Shape: (batch_size, n_targets)
|
||||
|
||||
# Compute gradients with regularization
|
||||
gradients = (
|
||||
(2 / batch_size) * X_batch.T @ errors
|
||||
) # Shape: (n_features + 1, n_targets)
|
||||
if l2_reg > 0:
|
||||
gradients[1:] += (
|
||||
2 * l2_reg * theta[1:]
|
||||
) # Apply L2 regularization (skip bias)
|
||||
if l1_reg > 0:
|
||||
gradients[1:] += l1_reg * np.sign(
|
||||
theta[1:]
|
||||
) # Apply L1 regularization (skip bias)
|
||||
|
||||
# Clip gradients to prevent exploding gradients
|
||||
clip_value = 1e3
|
||||
gradients = np.clip(gradients, -clip_value, clip_value)
|
||||
|
||||
gradient_norm += np.linalg.norm(gradients) # Track gradient norm
|
||||
theta -= lr * gradients # Update theta
|
||||
|
||||
batch_loss = np.mean(errors**2) # Compute batch loss
|
||||
if l2_reg > 0:
|
||||
batch_loss += l2_reg * np.sum(theta[1:] ** 2) # Add L2 penalty
|
||||
if l1_reg > 0:
|
||||
batch_loss += l1_reg * np.sum(np.abs(theta[1:])) # Add L1 penalty
|
||||
|
||||
epoch_loss += batch_loss
|
||||
|
||||
epoch_loss /= m // batch_size
|
||||
losses.append(epoch_loss)
|
||||
|
||||
# Compute validation loss
|
||||
if X_val is not None:
|
||||
val_predictions = X_val_b @ theta
|
||||
val_loss = np.mean((val_predictions - y_val) ** 2)
|
||||
val_losses.append(val_loss)
|
||||
|
||||
# Check for early stopping
|
||||
if epoch_loss < best_loss:
|
||||
best_loss = epoch_loss
|
||||
patience_counter = 0
|
||||
else:
|
||||
patience_counter += 1
|
||||
|
||||
if patience_counter >= patience:
|
||||
print(f"Early stopping at epoch {epoch}")
|
||||
break
|
||||
|
||||
# Log statistics
|
||||
epoch_time = time.time() - start_time
|
||||
if epoch % 50 == 0 or epoch == n_epochs - 1:
|
||||
val_loss_str = (
|
||||
f", Val Loss = {val_losses[-1]:.6f}" if X_val is not None else ""
|
||||
)
|
||||
print(
|
||||
f"Epoch {epoch}: Loss = {epoch_loss:.6f}{val_loss_str}, LR: {lr:.6f}, "
|
||||
f"Gradient Norm = {gradient_norm:.4f}, Epoch Time = {epoch_time:.2f}s"
|
||||
)
|
||||
|
||||
print(f"Final Loss: {losses[-1]:.6f}")
|
||||
if X_val is not None:
|
||||
print(f"Final Validation Loss: {val_losses[-1]:.6f}")
|
||||
return theta, losses, val_losses
|
||||
return theta, losses, None
|
||||
|
||||
|
||||
def predict_linear_regression(X, theta):
|
||||
"""
|
||||
Predict using the linear regression model.
|
||||
|
||||
Args:
|
||||
X: Input features (2D or 3D array).
|
||||
theta: Model weights.
|
||||
|
||||
Returns:
|
||||
predictions: Predicted values.
|
||||
"""
|
||||
X_b = np.hstack([np.ones((X.shape[0], 1)), X]) # Add bias term
|
||||
return X_b @ theta
|
||||
|
||||
|
||||
def evaluate_model(y_true, y_pred):
|
||||
"""Evaluate using sklearn's built-in MSE and R² functions."""
|
||||
mse = mean_squared_error(y_true, y_pred)
|
||||
r2 = r2_score(y_true, y_pred)
|
||||
mae = mean_absolute_error(y_true, y_pred)
|
||||
return iter((mse, r2, mae))
|
||||
|
||||
|
||||
import math
|
||||
|
||||
|
||||
def cosine_lr_schedule(epoch, max_lr=0.01, min_lr=0.001, total_epochs=1000):
|
||||
return (
|
||||
min_lr + (max_lr - min_lr) * (1 + math.cos(math.pi * epoch / total_epochs)) / 2
|
||||
)
|
||||
|
||||
|
||||
def step_decay_schedule(epoch, initial_lr=0.01, drop=0.5, epochs_drop=50):
|
||||
"""
|
||||
Step decay learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
initial_lr: Initial learning rate.
|
||||
drop: Factor by which to reduce the learning rate.
|
||||
epochs_drop: Number of epochs after which to reduce the learning rate.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
return initial_lr * (drop ** (epoch // epochs_drop))
|
||||
|
||||
|
||||
def exponential_decay_schedule(epoch, initial_lr=0.01, decay_rate=0.1, decay_steps=100):
|
||||
"""
|
||||
Exponential decay learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
initial_lr: Initial learning rate.
|
||||
decay_rate: Rate of decay.
|
||||
decay_steps: Number of steps for decay.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
return initial_lr * (decay_rate ** (epoch / decay_steps))
|
||||
|
||||
|
||||
def linear_decay_schedule(epoch, initial_lr=0.01, min_lr=0.001, total_epochs=1000):
|
||||
"""
|
||||
Linear decay learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
initial_lr: Initial learning rate.
|
||||
min_lr: Minimum learning rate.
|
||||
total_epochs: Total number of epochs.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
return max(min_lr, initial_lr - (initial_lr - min_lr) * (epoch / total_epochs))
|
||||
|
||||
|
||||
def cyclical_lr_schedule(epoch, base_lr=0.001, max_lr=0.01, step_size=200):
|
||||
"""
|
||||
Cyclical learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
base_lr: Minimum learning rate.
|
||||
max_lr: Maximum learning rate.
|
||||
step_size: Number of epochs for half a cycle.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
cycle = np.floor(1 + epoch / (2 * step_size))
|
||||
x = np.abs(epoch / step_size - 2 * cycle + 1)
|
||||
return base_lr + (max_lr - base_lr) * max(0, (1 - x))
|
||||
|
||||
|
||||
def polynomial_decay_schedule(
|
||||
epoch, initial_lr=0.01, min_lr=0.001, total_epochs=1000, power=2
|
||||
):
|
||||
"""
|
||||
Polynomial decay learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
initial_lr: Initial learning rate.
|
||||
min_lr: Minimum learning rate.
|
||||
total_epochs: Total number of epochs.
|
||||
power: Polynomial power.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
return min_lr + (initial_lr - min_lr) * ((1 - epoch / total_epochs) ** power)
|
||||
|
||||
|
||||
def warmup_schedule(epoch, warmup_epochs=10, initial_lr=0.01, max_lr=0.1):
|
||||
"""
|
||||
Warm-up learning rate scheduler.
|
||||
|
||||
Args:
|
||||
epoch: Current epoch.
|
||||
warmup_epochs: Number of warm-up epochs.
|
||||
initial_lr: Initial learning rate.
|
||||
max_lr: Maximum learning rate after warm-up.
|
||||
|
||||
Returns:
|
||||
Updated learning rate.
|
||||
"""
|
||||
if epoch < warmup_epochs:
|
||||
return initial_lr + (max_lr - initial_lr) * (epoch / warmup_epochs)
|
||||
return max_lr
|
||||
|
||||
|
||||
def autoregressive_prediction(model, initial_sequence, steps, scaler, n_features):
|
||||
"""
|
||||
Perform autoregressive predictions using the model.
|
||||
|
||||
Args:
|
||||
model: The trained model (theta for linear regression).
|
||||
initial_sequence: The initial sequence to start predictions (from test data).
|
||||
steps: Number of steps to predict.
|
||||
scaler: Scaler used for inverse scaling.
|
||||
n_features: Number of features in the data.
|
||||
|
||||
Returns:
|
||||
predictions: List of predicted values.
|
||||
"""
|
||||
sequence = initial_sequence.copy() # Start with the initial sequence
|
||||
predictions = []
|
||||
|
||||
for _ in range(steps):
|
||||
# Predict the next value
|
||||
next_prediction = predict_linear_regression(
|
||||
sequence.reshape(1, -1), model
|
||||
) # Shape: (1, n_targets)
|
||||
predictions.append(next_prediction[0]) # Append the prediction (flattened)
|
||||
|
||||
# Update the sequence: Remove the oldest timestep and append the new prediction
|
||||
sequence = np.roll(sequence, -n_features) # Shift sequence left by n_features
|
||||
sequence[-n_features:] = (
|
||||
next_prediction # Add the new prediction (entire target vector)
|
||||
)
|
||||
|
||||
# Rescale predictions back to original scale
|
||||
predictions_rescaled = inverse_scale(np.array(predictions), scaler, n_features)
|
||||
return predictions_rescaled
|
||||
|
||||
|
||||
def run_autoregressive_prediction(
|
||||
model, X_test, y_test, scaler, date_test, n_features, steps=None
|
||||
):
|
||||
"""
|
||||
Run autoregressive prediction and visualize the results.
|
||||
|
||||
Args:
|
||||
model: The trained model (theta for linear regression).
|
||||
X_test: Test features.
|
||||
y_test: Test labels.
|
||||
scaler: Scaler used for inverse scaling.
|
||||
date_test: Dates corresponding to the test set.
|
||||
n_features: Number of features in the data.
|
||||
steps: Number of steps to predict (default is the length of y_test).
|
||||
|
||||
Returns:
|
||||
autoregressive_predictions: Rescaled autoregressive predictions.
|
||||
"""
|
||||
if steps is None:
|
||||
steps = len(y_test) # Default to the length of the test set
|
||||
|
||||
# Use the first test sequence as the initial sequence
|
||||
|
||||
initial_sequence = X_test[0]
|
||||
|
||||
# Perform autoregressive prediction
|
||||
autoregressive_predictions = autoregressive_prediction(
|
||||
model, initial_sequence, steps, scaler, n_features
|
||||
)
|
||||
|
||||
# Visualize the results
|
||||
plt.figure(figsize=(12, 6))
|
||||
plt.plot(date_test, inverse_scale(y_test, scaler, n_features), label="Actual")
|
||||
plt.plot(date_test, autoregressive_predictions, label="Autoregressive Predictions")
|
||||
plt.title("Autoregressive Predictions vs Actual")
|
||||
plt.xlabel("Date")
|
||||
plt.ylabel("Value")
|
||||
plt.legend()
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
return autoregressive_predictions
|
||||
@@ -0,0 +1,75 @@
|
||||
import numpy as np
|
||||
import pandas as pd
|
||||
from sklearn.preprocessing import MinMaxScaler # type: ignore[import]
|
||||
|
||||
# from sklearn.model_selection import train_test_split
|
||||
|
||||
|
||||
def scale_data(data):
|
||||
"""Normalize the data using MinMaxScaler.
|
||||
|
||||
Args:
|
||||
data: DataFrame or array with multiple columns.
|
||||
|
||||
Returns:
|
||||
scaled_data: Scaled data as a NumPy array.
|
||||
scaler: Fitted MinMaxScaler object.
|
||||
"""
|
||||
if isinstance(data, np.ndarray):
|
||||
if data.ndim == 1:
|
||||
data = data.reshape(-1, 1) # Ensure 2D for single-column arrays
|
||||
else:
|
||||
data = data.to_numpy() # Convert DataFrame to NumPy array
|
||||
|
||||
scaler = MinMaxScaler()
|
||||
scaled_data = scaler.fit_transform(data)
|
||||
return scaled_data, scaler
|
||||
|
||||
|
||||
def inverse_scale(scaled, scaler, n_features):
|
||||
"""Inverse transform using stored scaler."""
|
||||
return scaler.inverse_transform(scaled.reshape(-1, n_features))
|
||||
|
||||
|
||||
def create_sequences(data, seq_length):
|
||||
"""
|
||||
Create sequences for time-series data.
|
||||
|
||||
Args:
|
||||
data: Scaled data as a NumPy array (multi-column supported).
|
||||
seq_length: Length of each sequence.
|
||||
|
||||
Returns:
|
||||
X: Input sequences (3D array).
|
||||
y: Target values (2D array for multi-column, 1D for single-column).
|
||||
"""
|
||||
X, y = [], []
|
||||
for i in range(len(data) - seq_length):
|
||||
X.append(data[i : i + seq_length])
|
||||
y.append(data[i + seq_length]) # Automatically handles multi-column
|
||||
return np.array(X), np.array(y)
|
||||
|
||||
|
||||
def add_rolling_features(data, window=5):
|
||||
"""
|
||||
Add rolling mean and standard deviation features to the dataset.
|
||||
|
||||
Args:
|
||||
data: DataFrame containing the original features.
|
||||
window: Window size for rolling calculations.
|
||||
|
||||
Returns:
|
||||
DataFrame with additional rolling features.
|
||||
"""
|
||||
rolling_data = data.copy()
|
||||
for col in data.columns:
|
||||
rolling_data[f"{col}_rolling_mean_{window}"] = (
|
||||
data[col].rolling(window=window).mean()
|
||||
)
|
||||
rolling_data[f"{col}_rolling_std_{window}"] = (
|
||||
data[col].rolling(window=window).std()
|
||||
)
|
||||
|
||||
# Drop rows with NaN values introduced by rolling calculations
|
||||
rolling_data = rolling_data.dropna()
|
||||
return rolling_data
|
||||
-163
@@ -1,163 +0,0 @@
|
||||
from sklearn.model_selection import train_test_split
|
||||
import torch
|
||||
|
||||
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
|
||||
|
||||
from sklearn.preprocessing import MinMaxScaler
|
||||
|
||||
import numpy as np
|
||||
from load_data import load_this_data
|
||||
|
||||
a = load_this_data()
|
||||
|
||||
# time series forecasting
|
||||
|
||||
|
||||
scaler = MinMaxScaler()
|
||||
print(a.columns)
|
||||
scaled_data = scaler.fit_transform(a)
|
||||
|
||||
|
||||
def create_sequences(data, seq_length):
|
||||
"see this? return[0] is the big x and return[1] is the big y. and h(x) = y. and h(x) is the model."
|
||||
xs = []
|
||||
ys = []
|
||||
for i in range(len(data) - seq_length):
|
||||
x = data[i : (i + seq_length)]
|
||||
y = data[i + seq_length]
|
||||
xs.append(x)
|
||||
ys.append(y)
|
||||
return np.array(xs), np.array(ys)
|
||||
|
||||
|
||||
seq_length = 20
|
||||
|
||||
X, y = create_sequences(scaled_data, seq_length)
|
||||
|
||||
X_train, X_test, y_train, y_test = train_test_split(
|
||||
X, y, test_size=0.2, random_state=42
|
||||
)
|
||||
from torch.utils.data import TensorDataset, DataLoader
|
||||
|
||||
X_train_tensor = torch.tensor(X_train, dtype=torch.float32)
|
||||
y_train_tensor = torch.tensor(y_train, dtype=torch.float32)
|
||||
|
||||
train_dataset = TensorDataset(X_train_tensor, y_train_tensor)
|
||||
train_loader = DataLoader(train_dataset, batch_size=32, shuffle=True)
|
||||
|
||||
|
||||
import torch.nn as nn
|
||||
|
||||
|
||||
class LSTMModel(nn.Module):
|
||||
def __init__(self, input_size, hidden_size, num_layers, output_size):
|
||||
super(LSTMModel, self).__init__()
|
||||
self.hidden_size = hidden_size
|
||||
self.num_layers = num_layers
|
||||
self.lstm = nn.LSTM(input_size, hidden_size, num_layers, batch_first=True)
|
||||
self.fc = nn.Linear(hidden_size, output_size)
|
||||
|
||||
def forward(self, x):
|
||||
h0 = torch.zeros(self.num_layers, x.size(0), self.hidden_size).to(device)
|
||||
c0 = torch.zeros(self.num_layers, x.size(0), self.hidden_size).to(device)
|
||||
|
||||
out, _ = self.lstm(x, (h0, c0))
|
||||
out = self.fc(out[:, -1, :]) # Take the output from the last time step
|
||||
return out
|
||||
|
||||
|
||||
model = LSTMModel(
|
||||
input_size=X_train.shape[2],
|
||||
hidden_size=64,
|
||||
num_layers=2,
|
||||
output_size=y_train.shape[1],
|
||||
)
|
||||
model.to(device)
|
||||
criterion = nn.MSELoss()
|
||||
optimizer = torch.optim.Adam(model.parameters(), lr=0.001)
|
||||
|
||||
train_losses = []
|
||||
val_losses = []
|
||||
|
||||
|
||||
for epoch in range(100):
|
||||
model.train()
|
||||
running_train_loss = 0.0
|
||||
|
||||
# inputs, targets
|
||||
for batch_X, batch_y in train_loader:
|
||||
batch_X = batch_X.to(device)
|
||||
batch_y = batch_y.to(device)
|
||||
|
||||
outputs = model(batch_X)
|
||||
loss = criterion(outputs, batch_y)
|
||||
|
||||
optimizer.zero_grad()
|
||||
loss.backward()
|
||||
optimizer.step()
|
||||
|
||||
running_train_loss += loss.item() * batch_X.size(0)
|
||||
if (epoch + 1) % 10 == 0:
|
||||
print(f"Epoch [{epoch+1}/100], Loss: {loss.item():.4f}")
|
||||
|
||||
epoch_train_loss = running_train_loss / len(train_loader.dataset)
|
||||
train_losses.append(epoch_train_loss)
|
||||
|
||||
model.eval()
|
||||
|
||||
X_test_tensor = torch.tensor(X_test, dtype=torch.float32).to(device)
|
||||
y_test_tensor = torch.tensor(y_test, dtype=torch.float32).to(device)
|
||||
val_dataset = TensorDataset(X_test_tensor, y_test_tensor)
|
||||
val_loader = DataLoader(val_dataset, batch_size=64, shuffle=False)
|
||||
|
||||
# with torch.no_grad():
|
||||
# running_val_loss = 0.0
|
||||
# predictions = model(X_test_tensor)
|
||||
# test_loss = criterion(predictions, y_test_tensor)
|
||||
# print(f"Test Loss: {test_loss.item():.4f}")
|
||||
|
||||
running_val_loss = 0.0
|
||||
predictions = []
|
||||
with torch.no_grad():
|
||||
for inputs, targets in val_loader:
|
||||
inputs, targets = inputs.to(device), targets.to(device)
|
||||
outputs = model(inputs)
|
||||
loss = criterion(outputs, targets)
|
||||
running_val_loss += loss.item() * inputs.size(0)
|
||||
predictions.append(outputs.cpu().numpy()) # Collect all batches
|
||||
|
||||
epoch_val_loss = running_val_loss / len(val_loader.dataset) # len(val_dataset)
|
||||
val_losses.append(epoch_val_loss)
|
||||
|
||||
predictions = np.concatenate(predictions, axis=0)
|
||||
import matplotlib.pyplot as plt
|
||||
|
||||
y_test_cpu = y_test_tensor.cpu().numpy()
|
||||
|
||||
predictions_rescaled = scaler.inverse_transform(predictions)
|
||||
y_test_rescaled = scaler.inverse_transform(y_test_cpu)
|
||||
|
||||
|
||||
fig, (ax1, ax2) = plt.subplots(
|
||||
1, 2, figsize=(14, 5), gridspec_kw={"width_ratios": [1, 3]}
|
||||
)
|
||||
|
||||
# Loss curve on the left
|
||||
ax1.plot(train_losses, label="Train Loss")
|
||||
ax1.plot(val_losses, label="Val Loss")
|
||||
ax1.set_title("Loss Curve")
|
||||
ax1.set_xlabel("Epoch")
|
||||
ax1.set_ylabel("Loss")
|
||||
ax1.legend()
|
||||
ax1.grid(True)
|
||||
|
||||
# Prediction vs Actual on the right
|
||||
ax2.plot(y_test_rescaled, label="Actual")
|
||||
ax2.plot(predictions_rescaled, label="Predicted")
|
||||
ax2.set_title("Actual vs. Predicted")
|
||||
ax2.set_xlabel("Sample")
|
||||
ax2.set_ylabel("Value")
|
||||
ax2.legend()
|
||||
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
+323
@@ -0,0 +1,323 @@
|
||||
import matplotlib.pyplot as plt
|
||||
import numpy as np
|
||||
|
||||
|
||||
# data exploration
|
||||
|
||||
|
||||
def plot_value_distribution(data):
|
||||
# import matplotlib.pyplot as plt
|
||||
|
||||
plt.figure(figsize=(8, 4))
|
||||
plt.hist(data.iloc[:, 0], bins=40, color="skyblue", edgecolor="black")
|
||||
plt.title("Distribution of Values")
|
||||
plt.xlabel(data.columns[0])
|
||||
plt.ylabel("Frequency")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_time_series(
|
||||
data, feature_names=None, title="Time Series Trends", xlabel="Date", ylabel="Value"
|
||||
):
|
||||
"""
|
||||
Plot time series data for specified features.
|
||||
|
||||
Args:
|
||||
data: DataFrame containing the time series data.
|
||||
feature_names: List of feature names to plot. If None, all features are plotted.
|
||||
title: Title of the plot.
|
||||
xlabel: Label for the x-axis.
|
||||
ylabel: Label for the y-axis.
|
||||
"""
|
||||
if feature_names is None:
|
||||
feature_names = data.columns
|
||||
|
||||
plt.figure(figsize=(12, 6))
|
||||
for feature in feature_names:
|
||||
plt.plot(data.index, data[feature], label=feature)
|
||||
plt.title(title)
|
||||
plt.xlabel(xlabel)
|
||||
plt.ylabel(ylabel)
|
||||
plt.legend()
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_original_vs_scaled(original_data, scaled_data, feature_names=None):
|
||||
"""
|
||||
Plot original and scaled data, aligned by date.
|
||||
"""
|
||||
if feature_names is None:
|
||||
feature_names = original_data.columns[:3] # demo
|
||||
|
||||
dates = original_data.index # Grab the datetime index
|
||||
|
||||
fig, axs = plt.subplots(2, 1, figsize=(12, 6), sharex=True)
|
||||
|
||||
for col in feature_names:
|
||||
axs[0].plot(dates, original_data[col], label=f"Original {col}")
|
||||
axs[0].set_title("Original Data")
|
||||
axs[0].legend()
|
||||
axs[0].grid(True)
|
||||
|
||||
for i, col in enumerate(feature_names):
|
||||
col_index = original_data.columns.get_loc(col)
|
||||
axs[1].plot(dates, scaled_data[:, col_index], label=f"Scaled {col}")
|
||||
axs[1].set_title("Scaled Data (MinMaxScaler)")
|
||||
axs[1].legend()
|
||||
axs[1].grid(True)
|
||||
|
||||
plt.xlabel("Date")
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
def visualize_sequence_window(series, seq_length=5, start_idx=0):
|
||||
"""
|
||||
Visualize how a sequence window is used to create X (input) and y (target).
|
||||
|
||||
Parameters:
|
||||
series (pd.Series or np.ndarray): 1D time series data
|
||||
seq_length (int): Length of input window
|
||||
start_idx (int): Where to start slicing from for demo
|
||||
"""
|
||||
if isinstance(series, np.ndarray):
|
||||
data = series
|
||||
else:
|
||||
data = series.to_numpy()
|
||||
|
||||
x_seq = data[start_idx : start_idx + seq_length]
|
||||
y_val = data[start_idx + seq_length]
|
||||
|
||||
full_seq = np.concatenate([x_seq, [y_val]])
|
||||
|
||||
plt.figure(figsize=(8, 3))
|
||||
plt.plot(range(start_idx, start_idx + seq_length + 1), full_seq, marker="o")
|
||||
plt.axvline(x=start_idx + seq_length - 0.5, linestyle="--", color="gray")
|
||||
|
||||
for i in range(seq_length):
|
||||
plt.text(
|
||||
start_idx + i, x_seq[i], f"x[{i}]", ha="center", va="bottom", fontsize=9
|
||||
)
|
||||
plt.text(
|
||||
start_idx + seq_length,
|
||||
y_val,
|
||||
"y",
|
||||
ha="center",
|
||||
va="bottom",
|
||||
color="red",
|
||||
fontsize=9,
|
||||
)
|
||||
|
||||
plt.title(f"Sequence Window (seq_length={seq_length}) → Predict Next")
|
||||
plt.xlabel("Time Step")
|
||||
plt.ylabel("Value")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
# training analysis
|
||||
|
||||
|
||||
def plot_loss_curve_with_annotations(losses, annotate_min=True):
|
||||
"""
|
||||
Plot the training loss curve with optional annotations.
|
||||
|
||||
Args:
|
||||
losses: List of loss values for each epoch.
|
||||
annotate_min: Whether to annotate the minimum loss point.
|
||||
"""
|
||||
plt.figure(figsize=(10, 6))
|
||||
plt.plot(losses, label="Loss")
|
||||
if annotate_min:
|
||||
min_loss_idx = np.argmin(losses)
|
||||
plt.scatter(
|
||||
min_loss_idx,
|
||||
losses[min_loss_idx],
|
||||
color="red",
|
||||
label=f"Min Loss: {losses[min_loss_idx]:.4f}",
|
||||
)
|
||||
plt.title("Training Loss Curve")
|
||||
plt.xlabel("Epoch")
|
||||
plt.ylabel("MSE Loss")
|
||||
plt.legend()
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
# post training evaluation
|
||||
|
||||
|
||||
def plot_predictions(
|
||||
date_test,
|
||||
y_test_rescaled,
|
||||
predictions_rescaled,
|
||||
feature_names=None,
|
||||
title="Actual vs Predicted",
|
||||
xlabel="Date",
|
||||
ylabel="Value",
|
||||
):
|
||||
"""
|
||||
Plot actual vs predicted values for each column separately.
|
||||
|
||||
Args:
|
||||
date_test: Array of test dates.
|
||||
y_test_rescaled: Rescaled actual values.
|
||||
predictions_rescaled: Rescaled predicted values.
|
||||
feature_names: List of feature names corresponding to columns.
|
||||
title: Title of the plot.
|
||||
xlabel: Label for the x-axis.
|
||||
ylabel: Label for the y-axis.
|
||||
"""
|
||||
n_columns = y_test_rescaled.shape[1]
|
||||
if feature_names is None:
|
||||
feature_names = [f"Column {i}" for i in range(n_columns)]
|
||||
|
||||
for i in range(n_columns):
|
||||
plt.figure(figsize=(12, 6))
|
||||
plt.plot(date_test, y_test_rescaled[:, i], label=f"Actual ({feature_names[i]})")
|
||||
plt.plot(
|
||||
date_test,
|
||||
predictions_rescaled[:, i],
|
||||
label=f"Predicted ({feature_names[i]})",
|
||||
)
|
||||
plt.title(f"{title} ({feature_names[i]})")
|
||||
plt.xlabel(xlabel)
|
||||
plt.ylabel(ylabel)
|
||||
plt.xticks(rotation=45)
|
||||
plt.legend()
|
||||
plt.tight_layout()
|
||||
plt.grid(True)
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_residuals(date_test, residuals, feature_names=None):
|
||||
"""
|
||||
Plot residuals over time for each column separately.
|
||||
|
||||
Args:
|
||||
date_test: Array of test dates.
|
||||
residuals: Array of residuals (n_samples, n_columns).
|
||||
feature_names: List of feature names corresponding to columns.
|
||||
"""
|
||||
n_columns = residuals.shape[1]
|
||||
if feature_names is None:
|
||||
feature_names = [f"Column {i}" for i in range(n_columns)]
|
||||
|
||||
for i in range(n_columns):
|
||||
plt.figure(figsize=(10, 4))
|
||||
plt.plot(date_test, residuals[:, i], label=f"Residuals ({feature_names[i]})")
|
||||
plt.hlines(0, date_test.min(), date_test.max(), colors="red", linestyles="--")
|
||||
plt.title(f"Residuals Over Time ({feature_names[i]})")
|
||||
plt.xlabel("Date")
|
||||
plt.ylabel("Error")
|
||||
plt.xticks(rotation=45)
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.legend()
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_error_hist(errors, feature_names=None):
|
||||
"""
|
||||
Plot error histograms for each column separately.
|
||||
|
||||
Args:
|
||||
errors: Array of errors (n_samples, n_columns).
|
||||
feature_names: List of feature names corresponding to columns.
|
||||
"""
|
||||
n_columns = errors.shape[1]
|
||||
if feature_names is None:
|
||||
feature_names = [f"Column {i}" for i in range(n_columns)]
|
||||
|
||||
for i in range(n_columns):
|
||||
plt.figure(figsize=(8, 4))
|
||||
plt.hist(errors[:, i], bins=50, alpha=0.7, label=f"{feature_names[i]}")
|
||||
plt.title(f"Error Distribution ({feature_names[i]})")
|
||||
plt.xlabel("Absolute Error")
|
||||
plt.ylabel("Frequency")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_scatter(y_test, predictions):
|
||||
plt.scatter(y_test[:, 0], predictions[:, 0], alpha=0.5)
|
||||
plt.plot([0, 1], [0, 1], "r--")
|
||||
plt.title("Predicted vs Actual (Normalized)")
|
||||
plt.xlabel("Actual")
|
||||
plt.ylabel("Predicted")
|
||||
plt.grid(True)
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_residual_scatter(y_test, predictions):
|
||||
residuals = y_test - predictions
|
||||
plt.figure(figsize=(8, 6))
|
||||
plt.scatter(predictions, residuals, alpha=0.5)
|
||||
plt.axhline(0, color="red", linestyle="--")
|
||||
plt.title("Residuals vs Predictions")
|
||||
plt.xlabel("Predicted Values")
|
||||
plt.ylabel("Residuals")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
def plot_feature_importance(theta, feature_names):
|
||||
"""
|
||||
Plot feature importance based on learned weights.
|
||||
|
||||
Args:
|
||||
theta: Array of weights (including bias) with shape (n_features + 1, n_targets).
|
||||
feature_names: List of feature names.
|
||||
"""
|
||||
if feature_names is None:
|
||||
feature_names = [f"Feature {i}" for i in range(theta.shape[0] - 1)]
|
||||
|
||||
if theta.shape[0] != len(feature_names) + 1:
|
||||
raise ValueError(
|
||||
f"Mismatch: theta has {theta.shape[0]} rows (including bias), "
|
||||
f"but feature_names has {len(feature_names)} elements."
|
||||
)
|
||||
|
||||
# Average weights across all targets
|
||||
avg_theta = np.mean(theta, axis=1)
|
||||
|
||||
plt.figure(figsize=(10, 6))
|
||||
plt.bar(range(len(avg_theta)), avg_theta, tick_label=["Bias"] + feature_names)
|
||||
plt.xticks(rotation=45, ha="right") # Rotate labels 45 degrees
|
||||
plt.title("Feature Importance (Averaged Across Targets)")
|
||||
plt.xlabel("Features")
|
||||
plt.ylabel("Weight")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
|
||||
|
||||
# import plotly.express as px
|
||||
|
||||
|
||||
# def plot_interactive_time_series(data, feature_names=None):
|
||||
# if feature_names is None:
|
||||
# feature_names = data.columns
|
||||
|
||||
# fig = px.line(data, x=data.index, y=feature_names, title="Interactive Time Series")
|
||||
# fig.show()
|
||||
|
||||
|
||||
def inspect_residuals(predictions, residuals):
|
||||
plt.figure(figsize=(10, 6))
|
||||
plt.scatter(predictions, residuals, alpha=0.5)
|
||||
plt.axhline(0, color="red", linestyle="--")
|
||||
plt.title("Residuals vs Predictions")
|
||||
plt.xlabel("Predicted Values")
|
||||
plt.ylabel("Residuals")
|
||||
plt.grid(True)
|
||||
plt.tight_layout()
|
||||
plt.show()
|
||||
Reference in new issue
Block a user